YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ILM1_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFSFRAIVL FYCCMLTFAG IGFLWNPKFV VESGLVALIG ASMEVKPLIV TQDNLSTLAL  60
   61 SGLVFLILGM IYTISLLQSN FLFFSGITPI RAIFDFILTG FIYLKKEHIA SNSLTFTFAF 120
  121 CDLMWQFWMF AAMSEERAKY LKNQKKAEEL AARKAREVEE S

Type	Start	End	Confidence
Cytoplasmic	1	7	0.80
Transmembrane Helix	8	26	0.95
Non-Cytoplasmic	27	54	0.65
Transmembrane Helix	55	76	0.87
Cytoplasmic	77	80	0.56
Transmembrane Helix	81	104	0.76
Non-Cytoplasmic	105	108	0.63
Transmembrane Helix	109	132	0.76
Cytoplasmic	133	161	0.74