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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC869.01
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLQLLFLTL AQLAKHGLAI PLLQSSKTTT NSTLVASQEV NFTTYVYPDT NSTNIFPMPK  60
   61 CQNITLEDAT IDQLQNYMEN GILTSTDIVH CYLDRYLQVN PYVNGILQLN PDVLTIASEL 120
  121 DDERANGIIR GPLHGIPFIV KDNFATKDKM DTTAGSYALL GSIVPRDAYV VKQLREAGAV 180
  181 LFGHATLSEW ADMRSNDYSE GYSARGGQSR CPFNLTVNPG GSSSGSAISV ASNMIAFALG 240
  241 TETDGSIIDP AMRNGVVGLK PTVGLTSRYG VIPESEHQDT TGPIARTVRD AVYVFQSMWG 300
  301 IDENDIYTLN QTGKTPEDGD YMKFLSNKTS LEGARFGLPW KRLWQNAKAD EIDRLLEVVK 360
  361 QIEEAGAIVY NNTNFYNLDV ISNDGWNWEL GSVNESEYTV VKVDFYNNIK SYLSEVKNTE 420
  421 IHSLEDIVEY NNKYMGTEGG KPNIVPAFSS GQDGFLASLE WGGVKNETYW QAVEYVRRTS 480
  481 QDEGIDYALN YTDPKTNDSF ILNGLLVPSG TSITYQQAAK AGYPMITLPI GVKTNGRPFG 540
  541 LGIMHSAWQE PQLIKYGSAI EDLLQYKAKP KFYEYVAKNV PVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle