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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC1718.04
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQHTFIYDTC LWILSILIDF FFREVKTRGS FRVPRKGPLI LVAAPHANQF VDPLILMLQL  60
   61 RREVGRRTSI LVAAKSYRQR FIGLMSRAFG AIPVERAQDL AIRGEGKIFV VAEGDKTAIH 120
  121 GKDTLFTKHS VGDTLLLPNN YGSSHIASIK SDTLLYVKRE FRGEDAERVL LSPEGSSYKV 180
  181 APEIDQTYVY NEVRRRLVKG ACIALFPEGG SHDRPEMLPL KAGVAIMALE TLSQHPDCGL 240
  241 QLLPCGMNYF HPHRFRSRAV LEFGSPLSIP TEYVELYKAK KRREAIQGVL DMIYDALLSV 300
  301 TVQAPDYETL MVIQACRRLY KPAHIQFALP KVVDLNRKLI VGYNHFKHDP RVIRLHDKIL 360
  361 LYNRQLYRLG LRDHQVQSLQ YSRFMILYKL VYRCCKLFLL ALGALPGAIL FSPVFIAAHR 420
  421 ISVKKAAAAL KASSVKIQGR DILATWKLLV ALGMTPILYS FYALLCCYYI YSYKLIPHSS 480
  481 IFVYTVPIIS TFLFPMVTYA ALRFGEVAVD IYKSIRPLFL ALIPSKANAV YILKDERKQL 540
  541 VAEVTDLINK LGPELFPDFD PDRITTTIEK PERPSRFARR LSSSVASDVD NLSQLHDTDL 600
  601 NSEVSAPAPL QNVYLYSPNP SALPPSDEEE KDINDKAKLI RNALRQRMGQ RMTEIRSRDT 660
  661 PPEEVFSESD EELSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle