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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13810231
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FQNQRCLIPY GTTTTIRWYN ANFQAVQNNF SDYKNELISS HRPEASSLLD FLVKDQKKSG  60
   61 DISLHTKFNL YVDDLLKKSE KGQIKKFIND IKKDLATESQ LPLSAPFKDE STRTMTDPQV 120
  121 LAYIHQSMPY QYASLYSVLT DLKIVNSDVS CKSQHILDCG KGPGIGALAS YSVFPTPNSV 180
  181 SIVEENPFLK KIIYDIHHNI YPSTSPNPTS PVTLNRLPLG KKDSYTLVIA SNKLLEMKSE 240
  241 KELFDYLRSL WSLVSNDGGL LVLCERGTKR GFSLIQRART FLLQKSKNTS DKQFNAHIVA 300
  301 PCPHDGRCPI DIENGVRANI CSFKQHFFLS PFSRLYVPRS HRRSSDRSHY SYVVIQKGIT 360
  361 RPLNNTTQRF KNDEDLLENV NVTSPTLKNW PRIIRPPLKR DGHVIIDVCD SDARLRRNIV 420
  421 PKSQGKLAYR LARKSAWGDL FPLEGKVQST SPSSKITKHL KDASSTYSIN PPSYNKPKVE 480
  481 RNTTADPIFV GKRFYSTNRH KAFSRFADFN SHRFPCIFTS FSCYNCISGT RNISRQYSRD 540
  541 KFHYNQRTTI YYLVAISIFA LGLTYAAVPL YRLFCSKTGY GGTLNTDQSR MNAERMVPRK 600
  601 DNKRIRVTFN GDVAGNLSWK LWPQQREIYV LPGETALGFY TAENTSDHDI VGVATYNIVP 660
  661 GQAAVYFSKV ACFCFEEQKL DAHEKVDLPV FFFIDPEFAD DPNMKDIDDI LLSYTFFEAR 720
  721 YDTNGNLLTK LN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle