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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC30D10.17c
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKNSFSSMA NSVTSFFQSL TTPNRHADPS FRPSRREKQS RLPTPLQSVA ASAYSGVNAS  60
   61 QTGLLNDSRA NSVTNLPNSS NTSQVGLNNI SPAPVGYVPG SKTNELANNS MEMQEISPNG 120
  121 SASLPPPVSE SWRRIDRWAE ENYYELYCQL CYGATVADVD SLEYELECTL PRDVRESLYI 180
  181 HDGQDRGGQP TGILFGVTLL DIEEIEEESE LWRRVAQSYA EATLAGKIDQ AVASRQASFP 240
  241 PGAVQCVYAH PGWIPLAKDF VGNNIAIDLA PGPAGQWGQV ILFGRDQDTK YVVARSWADF 300
  301 LAIVAYDMEN GKWLVDEDDN SLRLIYGPPR EQWSYLDILK YRARKAERRK FKKRDGKRTT 360
  361 RPIPKSIAKE DVTNSANSTA PSTGTTVLDD GLDNNYEDIP LYGPSKDEEL IKKEELEADT 420
  421 DLGLINTSEI NQPANLPDEP TAETSNPVSA TTVEAVTTTA DNKDEEKNDH VTEDVSQNST 480
  481 IAEASSLQAQ EEEKEIETTS VKQE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle