YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	erg3
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYLLNYADQ YALDSIYNAV YPLARDNIVR QSISLFFLTW FGGMFLYLTF ASLSYQFVFD  60
   61 KSLMDHPKFL KNQVFMEVLT ALQNLPGMAL LTVPWFLAEL HGYSYLYDNI SDYGLKYFLC 120
  121 SLPLFVMFSD FGIYWAHRFL HHRYVYPRLH KLHHKWIICT PYASHAFKSA DGFLQSLPYH 180
  181 LFPFFFPLHK LTYLALFTFV NFWSIMIHDG KYISNNPIIN GAAHHNGHHI YFNYNYGQFT 240
  241 TLFDRLGNSF RAPDEAWFDK DLRQNEDVLR VELMEYEAIR NEVEGDDDRE YIANSAKKNH 300
  301

Type	Start	End	Confidence
Cytoplasmic	1	32	0.64
Transmembrane Helix	33	57	0.84
Non-Cytoplasmic	58	78	0.60
Transmembrane Helix	79	103	0.72
Cytoplasmic	104	113	0.50
Transmembrane Helix	114	137	0.87
Non-Cytoplasmic	138	185	0.64
Transmembrane Helix	186	205	0.84
Cytoplasmic	206	300	0.92