YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MNN9_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVYNKSRIV GQLLFVALGI TFIYYLFTPS VNSNAKVQIE NRGGNSYEIY DMNKITESSD  60
   61 PIRNKEEVLI LTPIARFYPQ YWKNLLELDY PRNLISLGFI VPSSKDGAKV HRELRNAINA 120
  121 VQKGPGDKRF ADVKILIQDS DLSSGQSEAE RHKFSAQKER RGKLAATRNT LLLSTLKPST 180
  181 SWVLWLDSDI VETPSTLIQD LAEHNEDVLV ANCFQKQGDK LTPYDFNSWV DSQTAQELAS 240
  241 HMDRDEILLE GYAELPTYRM LMAKIYEEHK DPSTIMALDG VGTTALLVKA SVHRDGALFP 300
  301 TFPFYHLIES EGFAKMAKRL GHGVYGLPYY LVFHHNE

Type	Start	End	Confidence
Cytoplasmic	1	8	0.90
Transmembrane Helix	9	28	0.90
Non-Cytoplasmic	29	337	0.99