YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SFT2_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGSFQSRLQ SIIQRTGETT AESTNSWYNR LRTSMPWSND YTEIPTNASG GNSYFQSSEF  60
   61 SLSRWERYML FGICLLGSLA CYAIACFMFP VLVLKPRKFV LLWTMGSLLA VLGFAIVQGF 120
  121 VAHFRQLTTM ERLPITLSYF VTLLATIIAT IKIKSTILSI VFGVLHILSF VAYLIAFFPF 180
  181 GTRTVSLGTR MASRSLSNWL P

Type	Start	End	Confidence
Cytoplasmic	1	68	0.92
Transmembrane Helix	69	92	0.93
Non-Cytoplasmic	93	99	0.79
Transmembrane Helix	100	122	0.93
Cytoplasmic	123	132	0.81
Transmembrane Helix	133	153	0.89
Non-Cytoplasmic	154	161	0.64
Transmembrane Helix	162	182	0.91
Cytoplasmic	183	201	0.81