YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC337.10c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSVLVLTS PGFASKEESL KKVFDLIDNG ASRELQMIDR VQSQLVNLPI NRYDSVIAAI  60
   61 DDGAWSSTLG PILSQAFASV HPGGTLRVYS TADEADESFE MTALLSGWLI ESKSPWILSR 120
  121 PNQVEAVPIK LSNKNGQSAS KNKILDFLKS DKENLISGDD DQELIDEDEL LDESAHDNVL 180
  181 KVPECKPEPG KKKRACKNCT CGLREMEEHE SSKTSAQLEA VKLTDTTEVD FTEKLKSKNA 240
  241 VSSCGNCYLG DAFRCSGCPY IGMPAFNPGD TVILAENRDK MSWMADDI

Type	Start	End	Confidence
Signal Peptide	1	14	0.76
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	288	0.99