YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC8E11.04c
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAKLNSVII NPSVAHTATV IFLHGLGDSG QGWSFMANTW SNFKHIKWIF PNAPSIPVTV  60
   61 NNGMKMPAWY DIYSFADMKR EDENGILRSA GQLHELIDAE LALGIPSDRI LIGGFSQGCM 120
  121 VSLYAGLTYP KRLAGIMGHS GFLPLASKFP SALSRVAKEI PILLTYMTED PIVPSVLSSA 180
  181 SAKYLINNLQ LKCLDRPFEG DAHSLSSESF MAMYKFTQTV IGSP

Type	Start	End	Confidence
Cytoplasmic	1	7	0.47
Transmembrane Helix	8	26	0.46
Non-Cytoplasmic	27	224	0.69