YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sec11
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLSFRQGL AQILNLLLVL SSAYMGYKTL SFVTDCESPV VVVLSESMEP SFQRGDLLFL  60
   61 DNRNPSFDEA KVPSVFEKII YGSPVGIGDI VVYSLPDRPI PIVHRVVKLY ESENQTHLIT 120
  121 KGDNNKIDDV AMFPKSINYL DRENHILGVV RGYFPYLGMI TIWLTDYPIL KYIMLGGLGL 180
  181 LTLIQKEEQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.92
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	189	0.96