YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC428.04
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTSVLWNF VAKLAVDHGL NTNPDQVFQT VENVGKSFEK YETSFLKSLF NGNLGLSLPS  60
   61 AINILTLIIV LYFSLVIVNK TTSIALALFK TLAVISFFLL IGCLFAYWFI NNGSF

Type	Start	End	Confidence
Non-Cytoplasmic	1	54	0.76
Transmembrane Helix	55	78	0.87
Cytoplasmic	79	86	0.69
Transmembrane Helix	87	110	0.92
Non-Cytoplasmic	111	115	0.75