YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mtf1
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPKILYDA AAFGGPRSTG FVKILNLNGR SSYKSSYLVN QNLMDEALVK SNLLKEYNSE  60
   61 KMTILEMAPG PGVTTTSLFN YFQPKSHVVL ESREVFSKPL QKLCTLSDGR IKWVHQDGYY 120
  121 WQTYEDVYVS KVLDPRIQTE EEQKLSPHRE LLFFAHLPHG YAGLLFVSQI LDFLSARDWL 180
  181 GIFGRVRVLL WLPCSPTVTL LGSRGFSKRS KTSVFREAFT DSRVLAASES TLQKLCMGYS 240
  241 KEAKENYQIS PNPLLVSPTP ITSEPHKEDL TLVEMCSKPQ DKQLSIPVFE SIVRILLTCK 300
  301 ATSLSKSIYY LGPGAETLLP SFTQCGINID MPVGLLSAAD FLTISKIIQK YPFKHHLHLG 360
  361 TIIEDS

Type	Start	End	Confidence
Cytoplasmic	1	151	0.54
Transmembrane Helix	152	171	0.59
Non-Cytoplasmic	172	187	0.67
Transmembrane Helix	188	206	0.58
Cytoplasmic	207	366	0.51