YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC13F5.04c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFFFRLVSS FAILRISFLS ITKSIKFCKL RALQVANPQR KAKTPSNHAT EELQQSSTNS  60
   61 TTLPTQEAAV ETNASASHET SFALPTTSPA ASLSISPTKS AAVSSEPNVE ADVKSLSSTP 120
  121 AAPQLNSPSH SYEPTTFPST TSITENLPTI DPTRSTRSSS HIQSLSPESK QTSDGHRPPS 180
  181 PTSITTTSTS IDPSVAFSSK STLATTRTNA PLSRPSQPTK ASPLNKFSAL EAIQSARSHA 240
  241 RYAYSALDYE DTTTAIHHLK SALKLLEEEE QGNHTAD

Type	Start	End	Confidence
Signal Peptide	1	19	0.61
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	277	0.98