YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC2E1P3.05c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTQSLFLTV LTLALSLVSK TSASQCSPRY GTCGGIYYDG PTCCVVGSSC IYSNPWYSQC  60
   61 IPVDYTGPCA KLYQQCGGIN YNGPTCCEPG SECIYNGPYY SQCIPVDIDP SSSSSSAASS 120
  121 TTSTTSSSSL VSSTTLTSSS PSAVSSTTSI PSISSTISSS VSTSSFTSLS SSGFSTVLSS 180
  181 TNTTSALPSS GWNVTGY

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	197	0.98