YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIO2_SCHPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMQWIWKSR RSLQNVFIRR SSQYHKPFWR RPLPATLLGC AVLGVAAVYF AKPSPIDENY  60
   61 PRSVAKYLHE ALYRQKGENN HDFQDAWKAY QSAIKQAESE KMDMESPPVQ GIRLQMANLL 120
  121 ASAGALHKAW SMYWDILERT SKLPDFLEQR VLIASKLIEL SEPLGLQKDA TKAADLIVKA 180
  181 LLSKQFNGDD EQKSRLFEQS ATLYFQAGTP SYAVPLYHEA LNLTMANPSC HGLILMNNLA 240
  241 TSLLAQTETV DKKHHETLMK QSQSWSQKAV DSYYFAYPKD RNQECHAGCA AAFYTLGQIA 300
  301 ERQGNIDLAL KHYKNSEALR KDDPYNDGSM LSHIAIDRLD KDAFIKKLDK SSSPTD

Type	Start	End	Confidence
Signal Peptide	1	47	0.97
N-region	1	38
H-region	39	44
C-region	45	47
Cleavage Site	47	48
Non-Cytoplasmic	48	356	0.99