YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC328.07c
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNSNQNSI HTPIPEFPEN RSTNRSELAA AFEPPDDDVE YSETAPLYSS ARASIEGEEA  60
   61 FYQHLSTPDP GNDSGHVRSS NDRIPSTSSN HADGHHVDSV FSNLSAKPTV ESNTEELEEE 120
  121 PPSYEQAAAD TAPPYWDTTM VIPDYGSNEI YIDGMSVGTG FSFVWSACVA ILFPFVGFLV 180
  181 TYVLSTTHLG RYGAQIGLSL TLFQRGYIMI SESGMENNDD QYNYDELPHQ KLIGSILIII 240
  241 GWCLVLVDTF GFIRIRRMKN AISRTDSPGE TSPEEVV

Type	Start	End	Confidence
Cytoplasmic	1	160	0.87
Transmembrane Helix	161	184	0.87
Non-Cytoplasmic	185	231	0.90
Transmembrane Helix	232	253	0.93
Cytoplasmic	254	277	0.96