YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sec22
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKLFRLPLA ASVDDESTER NLESHKKQAK LILKRLSPTS EKRASIESGD YTFHYLIDNG  60
   61 ICYLCICEQS YPRKLAFSYL EELAGEFWNS FGEEALQPGL RPYAFVQFDT FMQKSKRVYN 120
  121 TPRANDNLDK LNTELKDVTR VMTKNIEDLL YRGDSLEKMA DLSSDLRYSS AKYKKAARRV 180
  181 NLEALWRQYG PVSIIALLFL IFVYWRFFA

Type	Start	End	Confidence
Cytoplasmic	1	184	0.89
Transmembrane Helix	185	207	0.89
Non-Cytoplasmic	208	209	0.77