YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGA2_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFDVAGYLQ SYSLKDWIRI IVYVGGYMLI RPYLMKLGAK IQEREHRKSL LEGEVDGTLD  60
   61 PEMTHGTKPK EHGEFDTDDE EEEENPDAEF RWGYSARRRI RKQREEYFKN QDKSPLDAYA 120
  121 DDDEDIEEHL ED

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.92
Transmembrane Helix	17	35	0.57
Cytoplasmic	36	132	0.55