YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC11E3.14
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNIKNHLRL PIIGKREPEE QPDPIDHDLH VQRLRELLYG LDLMLDDDAQ GVKSAFSDDT  60
   61 VESAVGRSGS AFYNAILGLE PKAIEEATEA LYHAEQVTEE RKKHFEHHDR PIGSYPAGME 120
  121 LQLCLSDIYL MQSALGFVSD SIVDSMKAAY RIRKTFLSFS KMMEHVRDVQ HKKETGEIKS 180
  181 LSPNATFIDE FIESGVITGY GVLTFLVSMF PPSLSRILSL FSFHGVRKES LELLWRASKY 240
  241 PNIQGAIALL CLYAFNAMIQ SLGSIPPSNY DQELEHCLQA VKDIRKRYSK GALWAVMEAK 300
  301 IYFLTGESQM ALEMEELSID SSMEQIIAMK GFDTAMLYVG MRKFKQAADA IIELEDLNSW 360
  361 SHAFYRYFAG CCLLQHGKEI LGSGGSEEEA KASIDHGIEY LKNAPTLVQK KKKRRTLPVE 420
  421 AYLIRKVQKW EDRAEKLNIS IADAMDVPPY AELIYIFVIC SLKDPKEAEA LRADLETCKC 480
  481 SEEDEAGLKE FLLGVIDRHL KEYDSCRVRM EHVLQLDQGY LSRDNRELWI LPFAYYELAA 540
  541 LYWDMHGMAA EKEVNHYLKK AQEFNDYDLQ NRLSMLAQAA TQTLQSEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle