YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tlg1
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDPFYEVKA DASNQMEQVR KLYNSFMAAR NSGVLSPNTE LTYAIDELSE TLKDLKAAVE  60
   61 IAMKNSEHFG LDEEELKSRR RFVSELDIEL NNIQLKMGAA PSTPVSTEPY TVDNGASAGL 120
  121 SEEDHAVNRQ YQEQLYQQQD VMLDGVYDTI GNIRGQAALM GEELGQQADL LDTLDNSIET 180
  181 TNSKLRRGMK RLKDFTIASA DSKSGCCITV LIIILIALLV LVIVL

Type	Start	End	Confidence
Cytoplasmic	1	203	0.90
Transmembrane Helix	204	224	0.90
Non-Cytoplasmic	225	225	0.93