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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC24B10.10c
Protein type: Transmembrane
Type Confidence: 0.43
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPTTKRAIK EIVVYALAFG CSWYAAHKLL STLDPYRQKR QDTVSKSRKR LDEWAGEQVK  60
   61 ELETLELNEY EQIVASQLVL PSEIDVSFDD IGGMDEHVNQ LLQDVLFPLK YPEVFDTHGG 120
  121 LLSCPKGLLL YGPPGCGKTM LAKALAKQSQ ATFINVSVGL LTDKWFGESN KLVDALFTLA 180
  181 RKLEPTIIFI DEIDTFLRQR QRTDHEAMAQ IKAEFMSMWD GLLSGQSRVL VLGATNRPAD 240
  241 IDEAIRRRMP KVFSIPLPNA EQRRKILELY LKKVPLEANF DWNGVVNATA GLSGSYIKEV 300
  301 CRSALSVPRR ELFDKHGNDL EAIKYDIQSG GLRSLKTEDF YHYESLQNVS GIDVE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle