YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	sec66
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSIYVPLIY ITILMGSMYG VSRFVRKSKN QESKPVSEEW FGENYSRNIF FSLLQQNPPA  60
   61 EDTLLKAALV LRATEGLRRL MKLKVSRMAL NNLLNRGGVG DELIRKFGRL EKETELELMD 120
  121 IAKTANSLQP GWNQFIFQTC NEIIENEKIH SIIDNIPKDI DSISQRWQTE KILYEAADEE 180
  181 LRIQAQKELG VL

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.82
Transmembrane Helix	6	25	0.70
Cytoplasmic	26	192	0.65