YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC1071.04c
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKYNVSDFK SKFDKELTNH FNKNGYKQSF VFEDIRLLIA IACIIPAGLA FGIEYVYGFG  60
   61 VLKSYLKYLL PLYFLASCLL TFWSSVVKGS TVYVATKKER HIKISADTFL PLKNKPLITT 120
  121 KFTVLKNRNA VQLEWSVPVA HIFEEDGQIS SATFEAEISK YLSQIEN

Type	Start	End	Confidence
Cytoplasmic	1	36	0.94
Transmembrane Helix	37	57	0.93
Non-Cytoplasmic	58	68	0.81
Transmembrane Helix	69	92	0.84
Cytoplasmic	93	167	0.96