YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPCC737.06c
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQNEKKHLI LYTGDVTKNL KSGIWNASRI KSNLELVKAL ENVKLTKFTG DGDENLKKNI  60
   61 KVLVPVNEKP QKLDGKQEEY EIIVKLFFLD GENIDIKKRE ETLSQVFYNL HMLFGIDFVS 120
  121 TLVVSFPHIT FLKESGNSSS NEIYDSIDEI PPQEIQSWVD TWKLLEEKVG EGKIGTLGVS 180
  181 EFGVNELQRL ISSVNVVPES TQINIGQNCK LPNDLLNFAD RHHLKLFFHS DPSALLSESE 240
  241 ITSVIHKACP EIPNPARVDW VIRYTILTRH TAVIHQKGYI VQSTYTE

Type	Start	End	Confidence
Cytoplasmic	1	106	0.60
Transmembrane Helix	107	129	0.58
Non-Cytoplasmic	130	287	0.97