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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC736.06
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLSRLPACL LPLVGTKVSI QGWLVATSRQ VSKSISFHQL RDTHGTILQL LSTDKIILQQ  60
   61 KREPLVSSTD FSQQKSTSVM RTLSSIPPES VVQVTGKLQR RPEHDRRPGN EFELHVEDVK 120
  121 LLNVAKNLQL FPGDEKPGMR IQLANRHIQL RAPKYNSYLR QRSRLAYQVH SFFNDREFCE 180
  181 VETPLLFKST PEGAREFVVP SRLNPGKFYA LPQSPQQYKQ ILMASGIGNY YQIARCFRDE 240
  241 DLRFDRQPEF TQIDLEMSFV DKPHEIMEVV EDLLVRLVSF AKGITLAKPF QHITYQHAID 300
  301 KYGSDKPDIR FELPLKNITS LLPKQDPLIS TEILVYNDLS HSLSNAESRK LCEAVGENVV 360
  361 VTSIREHSQL QTWVKKLPQL RQLPIVAEEL NQKLQIGINS IVFMTNRPKY LVSGTTPLGK 420
  421 LRLLLHELLV KKKALPELDK DLLKFVWVVD FPLFSPTEEK NQSITSTHHP FTAPHWDDVH 480
  481 LLEKKPLSVR GLHYDIVVNG IELGGGSIRI HNPDIQRFVL KDVLKLPENR YATFEHLIRV 540
  541 LSSGCPPHGG IALGFDRLAA LLTNAPGIRE VIAFPKTSSG ADLLIGSPSA IPEEMLKDYN 600
  601 VAITRQTQNR N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle