YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PKR1_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYWVELWES IFTPGVTPVL AKSAHVACGA LVAVFLGLYI GTKSIHCLIL FFLAICLWLS  60
   61 LTWFLVELAH ARVNNDLQMS SQSANKNDDN SNNQNPSNNK EMSDKESDSA TTTQTFSVPE 120
  121 ELLRARTTAN NS

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.65
Transmembrane Helix	19	40	0.91
Cytoplasmic	41	46	0.57
Transmembrane Helix	47	71	0.84
Non-Cytoplasmic	72	132	0.67