YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC8E11.10
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSMFSLKGK TTLITGGSGG IGFSIAKAFA AAGSNVGLLY GRNKKALEYA AELRDKHGVQ  60
   61 AKAYSCPIEN RSAVIETTNQ AVEELGGRLD VMIANAGIAI PHLSLEDKNE DIWTKVVGIN 120
  121 LNGAYYTAQA AGHHFKKQGK GSLIFTASMS GHIANWPQQW ASYHATKAAV KHLARALAVE 180
  181 WAPFARVNSV SPGYIDTDLT LYADENLRKK WKEYTPQARI GLPDELPGAY LYLASDASSY 240
  241 CTGSDIIVDG GYCSR

Type	Start	End	Confidence
Signal Peptide	1	30	0.70
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	255	0.95