YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	pha2
Protein type:	Globular with Signal Peptide
Type Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASKIAFLG PRGTFSHQAA LLARPDSLLC SLPSFAGKLI FALKFILICF LAVLEALSSR  60
   61 QVDYAVLPIE NSTNGAVIPA YDLLKGRDDI QAVGEVLVPA HHCIIGKSLE NVQKILSHPQ 120
  121 AFGQCSKWIS ANVPNAEFVS VSSTSQAAAL ASKDITGTIV AISSELCAVE NQFNLLVKNI 180
  181 EDDSNNRTRF LLLRSGGFQD DLSPLKEKSL LQFYLSHPKK LSAVFEVFAA HKVVITNLVV 240
  241 RPSCKFPWTY IYFVECLGME KHLIDRVGKY CDTFTFMGSY TNQISYF

Type	Start	End	Confidence
Signal Peptide	1	23	0.34
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	287	0.88