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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC821.05
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTTSLNVP ELESPPIERV ELESLLVMNI IKHCRDSFPN MGTIGQLVGI DIDGVLQVSS  60
   61 SFESPSVLEN EESAVNKSVS GKARQAHTEA MLNRLQYIGA VTGHVGWYLG AYVSSFLSSP 120
  121 FFVETQYAYQ KANPNSIAFL YDLSQSSNGT LYMRAYQLTP EFMAAHEEKT WTASSLNSHN 180
  181 LTPSNVIREL PIVIHNSHLA TCLLHSLSEP PTPASTLTAE AALEDCESNL PLTETFSNFE 240
  241 VSLGTRYRKN IELLLESTDE FHYEQGNLGF HQRQLAREQA KIQQWIAKRK AENANRAAEN 300
  301 LQPLPLDDWK RIFKLPAEPR LLDSLLISSQ IMKSTQIDEQ SSAFLSKLAG VRNAYAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle