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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YEG5_SCHPO
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLEFSFGNL IAKNTENSTK EEGTWEVNKL MKFSSEEGRS SSDDYMFSSP DFEKAGNGDA  60
   61 EMREFFNFDG LPDQGLNLPS IAPPSLSHAS SPNLSNSQDE AECLPSDRQQ DYINPSLHLN 120
  121 RTVFPTPQHS ISDANFLANT VDQPLGDNPM FGESDVYLLK MDPMKQAPYE AGFNSVKSSG 180
  181 AIEDPLQFRQ PITMLETPFN ESINTLTPYA EDYAFSSLNT SAPPLSNKEY AFSVNHLPAI 240
  241 NEHKWKSRVE TNMLFELRIK SNDNQSVPFE YLRLPSWAHR EDKKRSSKPQ PLQPDPETVI 300
  301 HLVPTVLAGD KSSVVKTCCT RCLLRERKRN ARSQATKDAC MPNYTKLKAY ERNMTDASPE 360
  361 EKQQFRIKLL NQFPKLEDID EDRMIMVFTG PEYVRLQLDG NERVAHINAR ITCYSSHQSC 420
  421 PYFHIIWDLY SMSRLVDRLV FPEPVTVLDD HKSRNLTKSE KTGKSNSQQA PSNHVLSKSN 480
  481 TVPNLVTGFP TRSDNPPNEK RRRTSSSENS RALDIQLSAS DSHSPNSKST LKSVEGSAFS 540
  541 MSKSPSVLSM TTPSGVSPSI SKNGFHVVRV PSDAAGFQQR QQQEEGVLEA HTNESAPIAP 600
  601 FPYCTDDFSF SVEEKSSVNN LLTQFDEVAK PDFVSTPIKE NVDSSFINMT PPDVSHAPLI 660
  661 SRIIPNKGSI MGGYEVTILG ANFFNGLVCL FGDNPAAVTF SWSESTIIAT CPPATNAGTV 720
  721 PVTFQNYNSS SEAPVMFTYE DNLDNELYKL TVQVLGLKLT GSIQNPLTLS KKLLSSWRDD 780
  781 FAQYITNSIK QPPNSESKGQ SKKTLLHDSN MESLKSVISR IVKKDSNQSD DSVESTILAA 840
  841 FALVTDTTTP YLSDFSLVNE SGRSLLHLTA ACGLSNASTF LCNAGCDVNK RDALGYTPLH 900
  901 YASLYDHKDI CVNLLSNGAK PDVIGASGKK PIDLSSSEPI KLVFKEANNE QAQSISRSLI 960
  961 KDSEGSINTN ETLESTSIVN EIEESAVQTK SYSESMWNKT VTMFPSLQEL PQNYMSEVPS1020
 1021 MMQKAMLSTL KSISAIPDDV PPPYSEFADD TTAQAGSSKR DSAISEDPDH HKSVWWSLRW1080
 1081 QSRLVGRGKS TALTPEETRA IQEQAKTLKK AGMDFMLFSF WLPALLLLSI FGLRSYAQMI1140
 1141 GGYLYRCIIG I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle