YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tlg2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYRDRTGLY ITFRQSYSHH GQRLELSGWD PKEERQSLVH KDNKDNTVIE MDMLAPRWVT  60
   61 VEGEIDSLLL NTRRNINLLD KQYAKHVLPS FSDKTEQENE IQRLTIQITQ DFQRCQKLLQ 120
  121 VTKAQTNSAT GSEALMAKNF LSNLASRIQT ESAQFRKKQS TYLKKLRGLN ANISPVESKL 180
  181 DETVSDVAIS QSTIQQVALM EEQGEDEQAI RHERAVAKIA EGIIELAQMF QDLQVLVIEQ 240
  241 GALVDRIDFN IEQTQVHAKS AEKELIKAES HQKNTGRLRF ICFLILLIVA LIVILAIKLL 300
  301 R

Type	Start	End	Confidence
Cytoplasmic	1	277	0.60
Transmembrane Helix	278	300	0.89
Non-Cytoplasmic	301	301	0.60