YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC2C4.09
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLKIPCNSI YHQFQPLFRA RTVHKVRSLG LNGFYRKYHG FNSLRFVRVL QEAGIDDKKS  60
   61 ETLMRLISNV YSDMHEKISD FSVTKEQQDR VMYQQKVDFA HLRSELQSIE RQEMVALHSQ 120
  121 VEQLFSDVER LKTSFRDQLN NSTSEARLQL NIDRLNHYDE TASQDLKLRE LSAEIDTEMS 180
  181 NFRTQLASFK TQTLQWVFGI VTGSGALLLA YVRLII

Type	Start	End	Confidence
Non-Cytoplasmic	1	192	0.66
Transmembrane Helix	193	215	0.87
Cytoplasmic	216	216	0.63