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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC869.05c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAWGWVRNK FSSEDDYNDG ASNKDYPDRF NEFDNSQNDH NDYTQNNAQF QNAQTTTFGR  60
   61 TISRVKAYYE IPEDDELDEL ASIPQWFKKN VTSNIFKNFL HYLKSLFPII EWLPNYNPYW 120
  121 LINDLIAGIT VGCVVVPQGM SYAKVATLPS EYGLYSSFVG VAIYCFFATS KDVSIGPVAV 180
  181 MSLITAKVIA NVMAKDETYT APQIATCLAL LAGAITCGIG LLRLGFIIEF IPVPAVAGFT 240
  241 TGSALNILSG QVPALMGYKN KVTAKATYMV IIQSLKHLPD TTVDAAFGLV SLFILFFTKY 300
  301 MCQYLGKRYP RWQQAFFLTN TLRSAVVVIV GTAISYAICK HHRSDPPISI IKTVPRGFQH 360
  361 VGVPLITKKL CRDLASELPV SVIVLLLEHI SIAKSFGRVN DYRIVPDQEL IAMGVTNLIG 420
  421 IFFNAYPATG SFSRSAIKAK AGVKTPIAGI FTAAVVILSL YCLTDAFYYI PNAILSAVII 480
  481 HAVTDLILPM KQTILFWRLQ PLEACIFFIS VIVSVFSSIE NGIYVSVCLA AALLLLRIAK 540
  541 PHGSFLGKIQ AANKYGSDNI ANVRDIYVPL EMKEENPNLE IQSPPPGVFI FRLQESFTYP 600
  601 NASRVSTMIS RRIKDLTRRG IDNIYVKDID RPWNVPRQRK KKENSEIEDL RPLLQAIIFD 660
  661 FSAVNNLDTT AVQSLIDIRK ELEIYANETV EFHFTNIRSG WIKRTLVAAG FGKPKGHAVD 720
  721 ASVCVEVAAP LRDANLSAES SRNLSRIITP IYDDEEGNVS GHIYELDGKN NSDLSMHCQK 780
  781 GSNQVEIEFV EFNSRKYPFF HVDVASAVVD LQHRLLSPQK SDSFGSLKEG GTTTIKKIEN 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle