YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPCC4G3.13c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPEQLAGCA VVLTVTVLTL RWMFRVDKGG EVSESRTSSS GVDNEPPVNS EHVHLVKTVF  60
   61 PHLESSAIAY DLQKTKNVDA TIENALRGQP LPLPPRNSSL YARFPLSAGA GASSHSEETT 120
  121 PSHEVTSNVS SGSSASSLAS NEHRSLIETY NLSSRISSSD NSSSSTGNEE VRNRSKLPSS 180
  181 KKEREELFRK RKEEMILAAR KRMEGKIKGE KQDKN

Type	Start	End	Confidence
Signal Peptide	1	19	0.64
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	215	0.93