YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPC1_SCHPO
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNASEKLSQK AAQSVTRRFI TWLKSPDFRK YLCSTHFWGP LSNFGIPIAA ILDLKKDPRL  60
   61 ISGRMTGALI LYSSVFMRYA WMVSPRNYLL LGCHAFNTTV QTAQGIRFVN FWYGKEGASK 120
  121 QSVFENIMQA AKHPESGTRQ K

Type	Start	End	Confidence
Cytoplasmic	1	59	0.58
Transmembrane Helix	60	82	0.76
Non-Cytoplasmic	83	141	0.51