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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YELD_SCHPO
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPISSPGTRC SSDLKDPTLQ QYSAESVSTE QSLGTFEESK GSITENYVQD SSVDEHDDGN  60
   61 WQPMEVISLE PTHLINDIDD DNEIIEEKKE TEKVEESELE PRYTRVFRDE DDDQKHQLDS 120
  121 EAIKLLDIAD HGNEEISMDS QLEITGNILS ETEKMAYAGV CRLLILKMVD KIACFTTLPW 180
  181 YRGECKAALE DTIMWADKTT SCIYEHLGVT VEEQKMIENL HKHSVQIDDL SKILVSAHRA 240
  241 QTVSSLDAVL VDEVESSDSL SSLGKEKPVQ IDVRWTVLCD LFLVLISKSL YDCRSRSLLM 300
  301 AVGEVLDINE FDVAKFEKHI VETIQIDDTG ELEAGSSANT EAVMKLRRKV SRRKKYILMG 360
  361 LAGIGGGLVI GLSSGLLAPI ISAGIGAAFT TVGLSGVATS GFLAGGGSAA LITAGGAISG 420
  421 AHIGTTGMAH RKADVKTFEF RPLHAQRRAN VIVTVSGWML SKEDDVRLSF ATLDPIVGDI 480
  481 YSVFWEPEML ASAGQTMNIL ATEVVTQSLQ QVLGSTVLVS LMGALQWPLI LTKLGYLIDN 540
  541 PWNNSLDRAK ATGQLLADML CYRSLGVRPV TLVGYSLGAR VIYYCLRELE KKKEFSIIEN 600
  601 VYLFGTPVIF KRTSWLKAAS VVSGRFVNGY KKNDWILGYL FRATSGGIGR VAGLRQIDCI 660
  661 PGIENIDVTN LVSGHLAYRE SMPILLAAVG FEVLDEEVDL VSEPIPEPLR ERQSQLLYEI 720
  721 EAEECQNKQK ELIEKSLMQK GRSLSPKKSN AFFDSKKIRE ELKKVKKKYG SSFNSRWY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle