YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MUG80_SCHPO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFPYQHTSR SQVQPPLAAP GLSMFAPVSS SNSANSASSV AALLSHAPMY GLGQRRPSFL  60
   61 PGVSVPDTLS VRSGFSIPSS SHHPSAVPSL LSQHRLQQPQ PRLYPSAPLN YYWPSYQSVP 120
  121 SAAPPPPSQQ RYMPDSAVAY NPNQDQFGNS VNVSAACNNV SAPLIANNCA PSFYQSRHPV 180
  181 ADVPVTNNTA TTTSETDNTI PGNLNMPSVA NVQQRISPVC KTNMEDQEET VYTGGVAAKL 240
  241 DYKMDQMVEY LSIMTCKLYA RFLNNAQMHS LANSLPGLVF SFRKVVTQIL TSTRLPRASC 300
  301 LLALSYLSDR LDAASQTTDF VNQWTKESLF FQICALLTTA LILANKFLDD NTFTNQSWSQ 360
  361 VTGFRTALLN SFEQDWLASM SWNLSPGPRG QKAWEWWSAS YSLFTSSNAT YSGEQKTYSP 420
  421 TTLSTNAPPS PSSGRSCSNC NYYYPYTPVG YYPVYNRYAM T

Type	Start	End	Confidence
Signal Peptide	1	36	0.88
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	461	0.98