YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPBC18E5.05c
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFLLNRCI RDLSPLTVLK DNLQQTAKPI LNYYAKNAAS RGIKVLFISY ETLEKEAPEG  60
   61 IDCFLYATSW EKVKSLKELY EHISSWRTQG KQHIVMIDTI NPILNTSISS FTMFFGSVLA 120
  121 LGSICFLTSF HKDVTLENYP SYLPPCEVFL DFTSTCTVSL IGMQHLSVEH DAKMRSLPNP 180
  181 LLEELQDDKI ISLLGSNCET AIVLHVEFRK KSGRIIKESC VLKNGKLEPY TPFEETARGP 240
  241 EPADNQIDFN VSFNLNVSEK ERKERDKVFL PYFSAQMVGS QHKSSFVDEG TIIYHADEAD 300
  301 DFDEEEDADE DLLI

Type	Start	End	Confidence
Cytoplasmic	1	107	0.73
Transmembrane Helix	108	130	0.71
Non-Cytoplasmic	131	314	0.59