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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC3H7.03c
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRFIPSSAK ARALRRSAVT AYRLNRLTCL SSLQQNRTFA TQPTDDFLTG GAADYVDEMY  60
   61 DAWKKDPNSV HASWQAYFKN VQERGVSPSK AFQAPPLLDY ADSYTALDSS LINGNNYADI 120
  121 DVGIYMKVQL LVRAYQSRGH HLAKLDPLGI NVNHNRPSEL TLEHYGFTES DLNRTIHLGP 180
  181 GILPNFREAG RKTMTLREIV ETCEKIYCGS FAVEFTHISS RKRSNWILSH LETPTPFRYS 240
  241 HDQKIMIFDR LSWADSFERF LFTKFPNDKR FGLEGCEAMV PGMKALIDRS VDEGISNIVI 300
  301 GMAHRGRLNL LHNIVRKPAQ AIFSEFRGTQ DPDDEGSGDV KYHLGMNYQR PTPSGKRVSL 360
  361 SLVANPSHLE AEDPVVLGKV RAIQHYTSDE ASHEQSMGIL IHGDAAFAAQ GVVYETFGLH 420
  421 ALPGYSTGGT VHIVINNQIG FTTDPRFARS TPYCTDIAKS MEAPIFHVNG DDVEAVTFIC 480
  481 QLAADWRKAF KTDVVVDIVC YRRHGHNETD QPSFTQPRMY KAIAKHPPTF KIYTQQLLQE 540
  541 KTVSKAEVDA QEKRVWDILE SSFESSKNYK SDHREWLSNP WVGFASPKDL MTKILPSYPT 600
  601 GVNIDTLKQI GKALYTLPEG FDAHRNLKRI LNNRNKSISS GEGIDMPTAE ALAFGTLLEE 660
  661 GHHVRVSGQD VERGTFSQRH AVLHDQSSEN VYIPLNHLSP NQASFVIRNS SLSEYGVLGF 720
  721 EYGYSLSSPN ALVVWEAQFG DFANNAQCII DQFIAAGETK WLQRTGIVLS LPHGYDGQGP 780
  781 EHSSARMERY LQLCNEDPRE FPSEEKLQRQ HQDCNIQAIY VTKPSQYFHA LRRNIHRQFR 840
  841 KPLVIFFSKS LLRHPAARST IDEFDEKHGF KLILEEEEHG KSILPPEKIE KLIICSGQVW 900
  901 VALSKAREEN KIDNIAITRV EQLHPFGWKQ MAANISQYPN LKEIIWCQEE PLNAGAWTYM 960
  961 EPRIYTILKH LGRDLPVRYA GRPPSASVAA GNKQQHLAEQ EQFLNDALL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle