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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: apl5
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFERTLIDL IKGIRSHAND EEAFIATCLL ECRKEATSQD ADLKSEAILK LAYLEMLGVD  60
   61 ISWASFQIVE VMSSSKILQK QKGYLAAVQS FKPDTDVLML TTNLLKKDLM SSKVPEITLA 120
  121 IDGLSHFSTL GLARDLYRDV LILLNHSVPY VRKRTILLLY RLCLQYPEAI SACIPKLRER 180
  181 LDDPDTSVVN AAVSVICELA RRAPKNYLEF APDLFHLLTT SSNNWMLIKL IKLFASLTPY 240
  241 EPRLVKKLIP SLTDIIENTH AMSLLYECIN TIVSGNMLVG HSQCDKLASL CASKLRGFFE 300
  301 DTDQNLKYIA LLCLRKLANT HPSLVSAQLD IILKCLVDTD TSIRLRALDL VNEIVNKENI 360
  361 RTIVKTLMLQ LIVSSDESAV EDIRNSTATR IIEMTSKSTY MNIADFEWLL TVYVDLANIP 420
  421 GIDTGTLLNN QIIDLCVRVK ALRPFSVDIF SQAILDPSYV STTDCSVSEK RTDILPAIIW 480
  481 CLGEYAEFIE EYLDILDALT RPSFKKCSNL AHRLLLQAIT KIFCQWCLEE EPTWGVEKFG 540
  541 LVKLWVEKIV SFIEQFLNFQ DMEIQRRASE FYILFNQVSD IVNTSDTMEV LELQKKPPYI 600
  601 VQNTMYKLFF GEPLNPVAVK AQRKVMPDEN LDLNCPINGV IEVPKELLEN IIQSDDSLIN 660
  661 FDTEVPSSGI DTFSKKQFNS LESVPVQRDL SSPFYLSSNQ HTTTTNSEPE NLNVETSMSD 720
  721 EAFNADKVTK GLLMLLIILF LLIILVTKNK RRRKIFTSPS LQAMVVAQDE VPEGISLADI 780
  781 ENKENPSNSN VYSLISLDPP LSTNQGSMGD IVLETKSPIR VEKKKSKKKK KKKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle