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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBP16F5.08c
Protein type: Globular with Signal Peptide
Type Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLPTIRKIA IIGAGPSGLV TAKALLAEKA FDQVTLFERR GSPGGVWNYT STLSNKLPVP  60
   61 STNPILTTEP IVGPAALPVY PSPLYRDLQT NTPIELMGYC DQSFKPQTLQ FPHRHTIQEY 120
  121 QRIYAQPLLP FIKLATDVLD IEKKDGSWVV TYKGTKAGSP ISKDIFDAVS ICNGHYEVPY 180
  181 IPNIKGLDEY AKAVPGSVLH SSLFREPELF VGESVLVVGG ASSANDLVRH LTPVAKHPIY 240
  241 QSLLGGGDIQ NESLQQVPEI TKFDPTTREI YLKGGKVLSN IDRVIYCTGY LYSVPFPSLA 300
  301 KLKSPETKLI DDGSHVHNVY QHIFYIPDPT LAFVGLALHV VPFPTSQAQA AFLARVWSGR 360
  361 LKLPSKEEQL KWQDELMFSL SGANNMYHSL DYPKDATYIN KLHDWCKQAT PVLEEEFPSP 420
  421 YWGEKERSIR ENMWSIRAKF FGIEPPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle