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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19115177
Protein type: Globular with Signal Peptide
Type Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFLLPQTI LMSSRALRKL QRQRQTELLE EALDSESDED DEFSSTSGKK VVNVFEILEK  60
   61 ENNAINSEAE KSVSEEEQDE PLVEGESPIV STNKKAKNKK KKKKQQKKKK VTGKRDLDNQ 120
  121 SSDNEKLEGL ESSKNIDDDI DEIEKAAAEL KLKYREQDQV EHVAGVEESA TIPLDKELDE 180
  181 KLNKLLGVNI SMLNPDLEIR KIFGRIVEKR SVNARHDNLR RKRHVLVQPQ EGWPPLVRSG 240
  241 LGMKLTGQSQ DLECFFEITQ SRAYQEVQET FEYYVQTYDP NNLLMLLRSH PFHIDTLLQV 300
  301 SEIIDQQGDH ELSAELVARG LYAFDSILHP RFNLATGATR LPFAIPSNRR LFLCIWRYLQ 360
  361 SLQSRGCWRT VFEFCKALLQ FDMSDPYAIG TCIDIYALRR REFAWIIDFA NYLENSNKIS 420
  421 DTPNMLYSSA LAMFYVHGDT TDTRASMLAA FERAPYMLSE LLDTLNISFT KSSIPSPQDP 480
  481 VQELHSAMYA LYAKDSWSDP TVLAFINSIL EKETVTLHDV EGQFAELTEN LSRRVILLNE 540
  541 QSLRKFLPQR ILQGTILSFD PLPPDTYLSE SQVFGRDISR RIASFLSDYL SRAREVNENE 600
  601 EEPPAHEFDL PPAEQLLQQI ESEVGEESED GTPVMTRLRS FFGSLFTSTN SETEPAEEST 660
  661 EEMGQGD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle