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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC1786.01c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIPEESEIN KDYTVQEDLD EFAKYTCVYK KRHDEKIEYI TAQHDWNPVY EAVVPRKSKP  60
   61 GKDEKREGFM YPILRWPLMF TAFLCLTFVA FLYLLDRLYI NCYEYFIVWR GEARRLRKLL 120
  121 QEAKTYEEWK ERARALDKYF GNDEWKLDPV YDYYDYTLVQ AVYSSLVKHR EQKDWNALKS 180
  181 VLDVCVRSNF GGIDSSMLYS RTYSGTKKLV EDYVNELKVC LETVIDQRLY TAQERSKMFE 240
  241 YFSHNYGRTA LCLSGGASFA IYHTGVLRAL LNQDLIPNVI TGTSGGGLLA ALVCTRTNEE 300
  301 LKQLLVPELA SKYQSDIGNW LDATKRYFRT GARFDEILWA KTCMYFTRGS LTFAEAYKRT 360
  361 GRILNISVIP SDVHSPPKLI NYLTSPDTVI WSAVIASCAV PGILNPIPLM TRSQSHRLIP 420
  421 HNFGNRFKDG SLRTDIPLSE LRTQFNVHFS IVSQTNPHVQ VFFFSPRGTV GRPVSHRKGR 480
  481 GWRGGYVGSA IEQFLKYDMI KWLHVIRSLE LLPRPLGTDW SSVFLQKFDG TITIWPKTKF 540
  541 QDFYYILSPP SVERLGYMID AGQAATFPKL DFIAARMTIE KLIEKGRMMD KPSKLGRSID 600
  601 GTIGTSMSRG DIEISQESAS ISPEDIDIVN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle