YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPCC14G10.01
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLILGLTGSI ATGKSTVSRE FQEKYHIKII DADVLARKVV EPNTPCLIKI QKEFGNEVLH  60
   61 EDGTLNRAKL GQAVFQDAGK RSLLNSIIHP AVRLEMLKEL LRCYVRGYSI VILDVPLLFE 120
  121 AKMQFICWKT ICVSCDKSIQ KQRLLARNPE LTAEDAENRV QAQMPLELKC QLADIVIENN 180
  181 SDLETLYENI HNVLPLITPS YFFTLLCLIL PPLQITLQVI AFVSQKKKVS EFRKHI

Type	Start	End	Confidence
Non-Cytoplasmic	1	200	0.86
Transmembrane Helix	201	223	0.69
Cytoplasmic	224	236	0.66