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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC737.03c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSRLFTLG LGNSDDGLKS TFGDKTVTCF YCNKKKEKIR DGTSTWTCSI CEATNHIDEK  60
   61 GDILDYRPPT PTQDKGVGPF YAIRDFPSSS SFQSPFCEKC QMNQLIVNRM LADYLPDSSH 120
  121 PDYQAYEKAL PEYKKSIEEK FPIVCSECYD SVQDQLDAND YEAKNQVLGY WLQKSKEQLN 180
  181 AKVPHHYPKA SFVLWLLRGF GFSFFYLQSI VWHLYHSMII SLLPDGIRNL FLKAISYFLL 240
  241 DGSSSKIFYF NWLGFFVVFW NPYWYKMMDN PSWELFGRDQ YIQCQALYLI IRLTCLYLLS 300
  301 CYESEILNLS SDTNLESDFL LRQIHAAFFF VTICFTWISI SCLKPSPPPE VHLTGEILKP 360
  361 RKKRQESTSS VHRIGKESSD RKDGISGQNK LQQFATISIL NNTNATSHLG NQSVRERAPE 420
  421 ESPMTFLQKK MAALPTSSPV RPMLKPTLQL QNSPLSKLVP QEVGNKVNDS IHTTSNQPSK 480
  481 FSLNPSISLK GDNVIEKNLP FSVSTLKSTA KKDTGKAGDG QNREIQNEPV SLESHFSKSL 540
  541 ALQNDPTEVI QVKNVLHRNR RNAKLLIAFT ILFLVGLICG WRLNRFTMFI YYLCILVLAT 600
  601 YYVMKHNFYP LRKVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle