YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mug83
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNNTSRRSQ SQKFKNIPSI SAGSFSTMPV QHRGRRRRSK SIVGRAAQNA VLRSKEKTWI  60
   61 VPLILLTLLV GWYFVNPNGY IKYGIFLSYP IPGTNPAQYG KGRLDIAFCL FYALFFTFCR 120
  121 EFIMQEIIAR IGRHFNIRAP AKLRRFEEQA YTCLYFTVMG SWGLYVMKQT PMWFFNTDAF 180
  181 WEEYPHFYHV GSFKAFYLIE AAYWIQQALV LILQLEKPRK DFKELVVHHI ITLLLIGLSY 240
  241 YFHFTWIGLA VFITMDTSDI WLALSKCLNY VNTVIVYPIF VIFVFVWIYM RHYLNFKIMW 300
  301 AVWGTMRTIN SFDLDWAAEQ YKCWISRDVT LILLTALQLV NIYWLILILR IGYRAFTTND 360
  361 THDERSEDED EEVSDEKSSA KKND

Type	Start	End	Confidence
Cytoplasmic	1	57	0.96
Transmembrane Helix	58	76	0.93
Non-Cytoplasmic	77	103	0.88
Transmembrane Helix	104	124	0.90
Cytoplasmic	125	149	0.90
Transmembrane Helix	150	167	0.92
Non-Cytoplasmic	168	192	0.82
Transmembrane Helix	193	213	0.81
Cytoplasmic	214	224	0.90
Transmembrane Helix	225	247	0.87
Non-Cytoplasmic	248	269	0.82
Transmembrane Helix	270	290	0.91
Cytoplasmic	291	328	0.75
Transmembrane Helix	329	349	0.78
Non-Cytoplasmic	350	384	0.60