YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC19A8.14
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVPFVNFMI SSFPAAVLVG AVVGFMIGRK YSVADASRGY SSKNANKASN PEKESPVSVS  60
   61 NDEDSESETE LLDMLKGNSS LAALALAEGQ TKMVLVVRTD LGMTKGKIAA QCAHAALACY 120
  121 KIASAVDPDL VRIWENAGQA KITLQAQTEE TLELLQAQAM SLGLCARVIH DAGRTQIASG 180
  181 SATVLGIGPG PVSVINEVTG SLKLF

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.51
Transmembrane Helix	8	28	0.66
Cytoplasmic	29	205	0.52