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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPACUNK4.08
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDFSFEDKG LISRSGFGSR HVRRVVKALA LIFSLLILYL TISNVSDSPP KRDSLSLDDI  60
   61 VLQKYKPSYK QVNWIDSQGL KDTFLVKYGD LINIQDPYNL NKTLFSVSDL VYNGIQLDYD 120
  121 SYSISFDAKY VLVSVNKSQR WRHSSFAQYY LYNTETKDVN MLGQDNEHWT ISLAEWSPTG 180
  181 HQLSFVYNND LYVRKNDGNV QRLTYDGTVD VFNGLTDWIY EEEVLSSPST IWWSPDSDKI 240
  241 AFLKLNESEI PTYHYPLYTA ELDPSLPEFD YNKDMAIKYP KPGNPNPSVS LFVADLNSNA 300
  301 SSNFSLWHNE PLAEPVVQNV LWVNTSSVLV QFTNRNSTCI TARLLDTELK SIHTVKTECL 360
  361 EEGWYEVQQS AKMFPLNNSL VWENWSDGYF DILALDDYNH LAFIPFNGSS PIYLTSGAWD 420
  421 VTDGPIHIDG DFGNVYFLAT LKDSTERHLY YVSLDTLEIY GITDNGEDEG YYSTSFSPFG 480
  481 DFYVLNYHGP DVPWQELRST KDKDYCLSLE TNSRLKQQLS SITLPSVEYG KLTFNDTTFN 540
  541 FMERRPRNFD VNKKYPVLFF AYGGPGSQQV AKLFRVDFQA YLASHPDFEF IVVTLDGRGT 600
  601 GFNGNAFRYS VSRHLGEWES YDQGQAGKFW ADLPFVDENH VGIWGWSYGG YLTLKTLETQ 660
  661 DVFSYGMAVA PVTDWRLYDS VYTERYMDLP QYNKEGYKNS QIHDYEKFKQ LKRFFVAHGT 720
  721 GDDNVHFQHS MHLMDGLNLA NCYNYDMAVF PDSAHSISYH NASLSIYHRL SEWIGDALGR 780
  781 IDPSTGVRQH RWD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle