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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPAC14C4.15c
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAYEGDTLN NHGKSSTRQH WRKRSAVSSS LEFSSYEESN SPIENTEVLK VSEIEAKKRR  60
   61 RKKHRYIYLA VCLFFLASVL SCAIIFRFYL HTNRENFSLF KNDSYKQKEP ITVSHFGESI 120
  121 FLPYHQDIEW ITSTEGTVLY YDQSTFSLSL FYPDGKEYGS NVDSLITSFV LTCKNLHRKR 180
  181 YSSDMEYIAF SCSKDRRWRH SYYEDVYLVE RATGRIEHLA SDQSKKIVVA EWSPIGHKLV 240
  241 YGLGSNLFIW ESFSEPPVCI TDQSDLDGLF NGNSDWVYEE EILQSSKAVW WSPDGNCLSY 300
  301 LSIDDSKVPV HVLPFEQLDS KVEDQNRVNN FFHYSTPKDP IPFVKLFVNC FTDSGESIEV 360
  361 DSSFPLSTQH RYITDVAWAG NEKLMFVEVL RGNYERVTSL FDLSSRKTTI ENTEVSEHPL 420
  421 ALTSSLHLKY LSFESLGNLK ERYVRQYFLS NKKRIAIYEL DNPVPIYLTP VNISFLSDLY 480
  481 LINNTLYFTA ISSGSPFSRV YRLCTKSLIL SEINIQIGSG LFGIKVSNDQ NYLLVNYLGP 540
  541 EIPKQFIYSI HEDKVSTSND HSKNNLPSDS SSTSLGKVKL ELCNSLETNE ELIITKEKFA 600
  601 FPSVFFKVIK VKNITAYIQE IRPPNFNPRK RYPTVFHLYG APQSALVTGK YEMDINELMA 660
  661 SVYNFLVIKV DIVDISDVSG QHLFSDSHEL IIKSWIELLR SYVDTPYIDR HRVGIWGWSF 720
  721 GGYLTLKILE NADFIKTGAV VAPVTDWRYY DAYYSENLLG AYSKQTTAIY DKTAVHYSEN 780
  781 FRKLCGLLVL HGTSDDNVHI ENTMQLTKAM VEKGVYNYYP FIVPNANHEF SDPTDYTFLR 840
  841 EKLSGHFHHA LYC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle